cerr.dcm_export package

Submodules

cerr.dcm_export.iod_helper module

cerr.dcm_export.iod_helper.getFileMeta(dataType) → FileMetaDataset[source]

cerr.dcm_export.iod_helper.addEquipmentTags(ds: FileDataset, equipDict)[source]

cerr.dcm_export.iod_helper.addStudyTags(ds: FileDataset, studyDict)[source]

cerr.dcm_export.iod_helper.addSeriesTags(ds: FileDataset, seriesDict)[source]

cerr.dcm_export.iod_helper.addPatientTags(ds: FileDataset, patDict)[source]

cerr.dcm_export.iod_helper.addContentTags(ds: FileDataset, contentDict)[source]

cerr.dcm_export.iod_helper.addSOPCommonTags(ds: FileDataset)[source]

cerr.dcm_export.iod_helper.addGeneralImageTags(ds: FileDataset)[source]

cerr.dcm_export.iod_helper.addImagePlaneTags(ds: FileDataset)[source]

cerr.dcm_export.iod_helper.addImagePixelTags(ds: FileDataset)[source]

cerr.dcm_export.iod_helper.addRefFORTags(ds_refFOR: Sequence)[source]

cerr.dcm_export.iod_helper.addStructureSetTags(ds: FileDataset, structureDict)[source]

cerr.dcm_export.reg_iod module

cerr.dcm_export.reg_iod.getDcmTagVals(baseScanNum, planC, seriesOpts={})[source]

cerr.dcm_export.reg_iod.createREGDataset(base_series_data, reg_out_dcm_file) → FileDataset[source]

cerr.dcm_export.reg_iod.generateBaseDataset(file_name) → FileDataset[source]

cerr.dcm_export.reg_iod.getFileMeta() → FileMetaDataset[source]

cerr.dcm_export.reg_iod.addRequiredElementsToDs(ds: FileDataset)[source]

cerr.dcm_export.reg_iod.addSequenceListsToDs(ds: FileDataset)[source]

cerr.dcm_export.reg_iod.addStudyAndSeriesInformation(ds: FileDataset, series_data)[source]

cerr.dcm_export.reg_iod.addPatientInformation(ds: FileDataset, series_data)[source]

cerr.dcm_export.reg_iod.addContentInformation(ds: FileDataset)[source]

cerr.dcm_export.reg_iod.getRefImgSeq(series_data)[source]

cerr.dcm_export.reg_iod.addRefSeriesSequence(ds: FileDataset, series_data)[source]

cerr.dcm_export.reg_iod.getDVFMetadata(dvf_nii_file)[source]

cerr.dcm_export.reg_iod.getImgDirMetadata(base_dir)[source]

cerr.dcm_export.reg_iod.createDeformSeq(base_series_data, mov_series_data, dvf_nii_file, pre_def_matrix_file=None, post_def_matrix_file=None)[source]

cerr.dcm_export.reg_iod.getREGTypeCodeSeq(series_type)[source]

cerr.dcm_export.reg_iod.getDVFGridSeq(dvf_nii_file)[source]

cerr.dcm_export.reg_iod.getMatrixSeq(deform_matrix_file)[source]

cerr.dcm_export.reg_iod.loadMatrixFile(deform_matrix_file)[source]

cerr.dcm_export.reg_iod.loadSortedSeriesData(dicom_series_path)[source]

cerr.dcm_export.reg_iod.getSlicePosition(series_slice: Dataset)[source]

cerr.dcm_export.reg_iod.get_slice_directions(series_slice: Dataset)[source]

cerr.dcm_export.reg_iod.create(filePath, baseScanNum, movScanNum, dvf_nii_file, reg_out_dcm_file, pre_matrix_file, post_matrix_file, planC, seriesOpts={})[source]

cerr.dcm_export.reg_iod.createDVF(base_dir, mov_dir, dvf_nii_file, pre_matrix_file, post_matrix_file, reg_out_dcm_file)[source]

cerr.dcm_export.rtstruct_iod module

cerr.dcm_export.rtstruct_iod.getDcmTagVals(structNumV, planC, seriesOpts={})[source]

cerr.dcm_export.rtstruct_iod.getRefFORSeq(structNumV, planC)[source]

cerr.dcm_export.rtstruct_iod.getStructSetROISeq(structNumV, planC)[source]

cerr.dcm_export.rtstruct_iod.convertCerrToDcmCoords(pointsM, planC)[source]

cerr.dcm_export.rtstruct_iod.getROIContourSeq(structNumV, planC)[source]

cerr.dcm_export.rtstruct_iod.getROIObservSeq(structNumV, planC)[source]

cerr.dcm_export.rtstruct_iod.create(structNumV, filePath, planC, seriesOpts={})[source]

Module contents